May 12, 2016

Designing a Biomanufacturing Facility Incorporating Single-Use Technologies


Asking the right questions is crucial to establishing a facility design.

By Peter Genest, John Joseph

The benefits of adopting single-use technologies in the production of biopharmaceuticals, such as lower capital investment and increased flexibility, are now well documented and widely recognized in the industry. But when building a new facility based on single-use technologies, or incorporating single-use into an existing facility, how do companies ensure they fully realize the benefits?

Facility design is a complex, multi-faceted, multi-step process, and early decisions can cause unforeseen limitations as the project progresses or, later, when further development of the facility is required. Asking the right questions at the outset and having the depth of experience and knowledge to understand the consequences of the answers are vital to establishing the right specifications during the design phase.

Identifying a partner or partners to support the design and build of a facility and the process that sits within it is the first key decision. Traditionally, an architectural and engineering firm and one, or possibly multiple, single-use process-equipment supply partners are selected. Working with a single external point of contact can help drive efficiencies in project-management and delivery. To be successful, however, the lead partner will need an understanding of biomanufacturing facility design, engineering, qualification, and validation, as well as the operational aspects of combining process hardware, single-use consumables, and automation platforms.

Overall, there are four sets of requirements to consider: product(s) to be made, process technologies, facility design, and supporting services. In each case, a series of questions will help identify objectives, design specifications, and potential constraints.

Considering the product
Product class. The first element that defines any biopharmaceutical manufacturing facility is the product itself. Will the facility be manufacturing monoclonal antibodies, recombinant proteins, vaccines, antibody-drug conjugates, or fragment antibodies? Also, will the products be mammalian cell-derived or microbial cell-derived? While these questions are most pertinent for the selection of the bioprocessing technologies required, they are also important for the design of the facility itself.

The promise of flexibility and simplification are often major deciding factors for choosing single-use technology. Removing the need for cleaning and sanitization, for example, means that switching between one product and another becomes quicker and easier. One way to take advantage of this flexibility is by making the facility multi-purpose (i.e., the manufacture of two or more products) to drive greater facility utilization. Deciding between a single- or multi-product facility impacts facility design considerations. Factors such as avoiding cross-contamination between products and ensuring that process-specific equipment can be moved around efficiently or housed nearby for rapid changeover need to be built into the design.

Regulations. With the plethora of regulatory guidelines and associated compliance requirements to adhere to when building a facility, it must be clear whether the product is for research and development purposes (pre-clinical), clinical trials, or commercial scale, as this will define the relevant GMP requirements. Also, if producing at commercial scale, which regulatory standard is needed? Is the product approved by FDA, the European Medicines Agency (EMA), the China FDA, Brazil’s National Health Surveillance Agency (ANVISA), or other agencies? In some cases, local requirements go beyond global ones. For example, Chinese fire regulations demand a greater level of fire resistance than is typical globally, and in countries such as Korea and Japan earthquake-proofing measures may have to be implemented.

Capacity. To define the necessary capacity of the facility, the primary question is how many batches per product per year are needed? However, this number has not always been defined when the facility design stage is reached. Alternatively, it should be possible to consider what quantity (in kilograms) of the bulk API needs to be produced for each product within the facility per year to meet clinical trial or commercial market requirements, and then work back to the number of batches.

For example, one can consider 2 x 2000-L bioreactors running a typical 14-day incubation period staggered a week apart, which equates to one batch produced each week. A typical batch at 2 g/L with a 70% overall yield in downstream processing and a 95% production success rate will therefore yield 138 kg/yr in total. The final yield here is determined by the product titer of the production bioreactor, combined with the efficiency of the downstream purification steps, both of which will be driven by the details of the bioprocess itself.

Selecting process technologies
The next step is to drill down into the discrete unit operations of the biomanufacturing workflow. If the production process is already defined, it should be listed out, but if not, then the contracted partner may be able to provide an equipment list with flexible process capability. Figure 1 shows an example of a production process from cell culture to bulk drug substance.

Figure 1: An example of a production process from cell culture to bulk drug substance. Figure is courtesy of GE Healthcare Life Sciences.

Starting with upstream, the status of the cell line and whether the process should be batch, fed-batch, or perfusion needs to be decided. Details about the nature of the process also need to be captured, including the bio-safety level and lengths of culture time for the seed and production bioreactors.

Moving to downstream, the overall yield of the purification process from post-cell culture harvest through to purified bulk API should be provided, along with an estimate of the step yield of each unit operation. If chromatography columns are used in the process flow, also specify the column volume and diameter required along with the desired number of cycles for each step.

Many single-use consumable supply partners now offer large customized system designs that can be tailored exactly to a specific workflow. Having an all-encompassing single-use system for a unit operation may seem to be the most efficient option. However, manufacturing a large single-use system comes with challenges. Packaging size and transportation integrity, sterility validation, component supply, handling and staging, installation, and operational use can all become more difficult and lead to greater risk levels. In some cases, defining and selecting smaller and simpler single-use systems to function in a modular workflow can be beneficial for minimizing risks.

Another important consideration in selecting single-use consumables is ensuring the supply chain is robust. Switching out any element of a validated process requires significant additional work. Therefore, make sure the supply partner has a proven track record, a materials policy in place, transparency on how they work with raw material suppliers, and a proactive communication program, and that they can provide examples of how they have dealt with previous situations of raw material changes. Also check the robustness of the qualification and validation package supplied, and make sure it meets all relevant regulatory requirements.

Breaking new ground or renovating?
The crucial point in designing a new facility is whether it will be a brownfield/renovation or a greenfield site. If it is brownfield, then designers and engineers will need to know if the footprint is fixed and whether there are any restrictions on the space, such as floor strength, ceiling height, or door and elevator sizes. When thinking about the layout, are there existing personnel, product, or material flows already in place? Also, is there existing support infrastructure, such as utilities, warehousing, or laboratory space, that can be accessed? If possible, plans for future plant expansion at the site, or at other sites, should be taken into account, particularly if they will have an impact on the product requirements of the facility being built now.

If it is a greenfield site, then there is increased flexibility in what can be built. However, sourcing an engineering firm with the relevant experience for a stick-built biopharmaceutical facility design can be challenging in some parts of the world. In response to this, another option that has emerged is the modular facility, made from standardized prebuilt units delivered to the greenfield site. This approach can have benefits in ensuring consistent standards of quality and reduction of time to first batch. This modular approach to building allows site excavation to run in parallel with module construction and validation of unit operations to begin offsite.

For those on a brownfield site or those building a new facility adjacent to an existing one, any current centralized automation platform for data archiving and process monitoring may need to be linked to the new facility. In other cases, a standalone automation platform will be appropriate.

Finally, the need for any additional support functions or buildings should be decided (e.g., fill and finish building, a black utility generation building, a warehouse, quality control [QC] laboratories, or a waste treatment plant).

The needs here can sometimes run counter to expectations. For example, when embarking on a first foray into single-use, many presume that the removal of the hard piping and utilities needed for clean in place of stainless steel will result in a reduced footprint requirement. What is not always anticipated is the warehousing requirements for the stock of single-use consumables, which also need to be unpacked and prepared in a staging area. While having adjacent warehousing on a site may fulfill this need, more efficient tracking, set-up, and speed of changeover will be achieved if some consumables staging and storage sits within the facility itself, in close proximity to, or as part of the cleanroom environment. In total, the footprint is likely to be reduced in switching from stainless steel to single-use, but the change is not always as significant as expected.

When adding a single-use train to complement existing stainless-steel production facilities, the flexibility of single-use can help reduce the need for additional utilities. In one case, when designers and engineers looked at which existing underutilized utilities could be shared with a new single-use set-up, it turned out to be a significant amount. For example, the flexibility of single-use meant that single-use unit operations requiring a water supply could be scheduled for the downtime or periods of low water consumption of the stainless-steel process. The reduced consumption of utilities required to operate the single-use process allowed for easier integration of additional capacity into the existing infrastructure of a production site.

Safety and time considerations
The ability of operators to safely work with biologic and potentially hazardous materials at any stage during the process is a key facility design consideration. Knowing where to place biosafety cabinets, if aseptic connections are required, and knowing any special design modifications to the single-use system (e.g., extra clamps, material selection, handling of highly toxic excipients) is vital.

Next, if known, specify the buffer and media requirements of each unit operation step in the production process, including whether any solutions require special handling (e.g., 70% ethanol), if steps are time-constrained (e.g., a highly-labile product that must be processed in a specified period), or if temperatures other than room temperature are required (e.g., temperature-sensitive media for upstream or cold purification processing).

The buffer preparation schedule for downstream purification can have a significant impact on facility design. Whether it is just-in-time preparation, one day in advance of use, or before any purification is started, will influence how much space is required for buffer storage or whether a system of built-in piping is required.

Planning for the future
Facility design is a multifaceted, interlocking web of needs, wants, and risks, and it must be properly managed from the outset to accommodate and account for all requests. Management includes being able to step back and take a holistic view. The prime driver and desired outcome, whether it is shortest time to market, lowest overall cost, or capital preservation, will significantly direct the decisions made at all stages of the design and building process.

For example, for a small biotech that was particularly concerned about reducing capital expenditure, the ultimate recommendation was to buy-in ready-made buffer and media in single-use liquid delivery bags. The overall scale and output of the facility was relatively low, and therefore the additional infrastructure required for in-house preparation was not going to drive significant savings in the longer term. This change in processing methodology minimized both footprint and utility needs.

Another element to consider at this point is how much “future flexibility” to account for during the design and build phase. Do you want to allow for the possibility of adding more production bioreactors to expand manufacturing capacity? Do you want to add 10% more communication drops for the integration of future equipment? The balance to be struck is between too much and not enough.

One reason such flexibility is important is that future manufacturing needs are always uncertain. Factors such as increased productivity and titer, coupled with increased market competition due to products coming off patent, has led to some stainless-steel facilities becoming underutilized and ending up shut down or sold.
The facility itself is only the beginning. Operational training will be required, as a minimum, but many supply partners can offer a much wider range of services. Validation requires significant experience and know-how and has the potential to consume significant internal resources. Outsourcing this element to an experienced partner can be a cost-effective option.

Ultimately, of course, budget is a crucial factor, along with when production needs to commence. But these should be considered alongside a close appraisal of the experience and depth of knowledge of the team that will be delivering the project. By mapping skills against requirements, it is possible to identify key attributes external partners need to have to make a project a success, first time.

About the authors
Peter Genest is global operations manager, FlexFactory, tel: 1.860.670.3014, pete.genest@ge.com, and John Joseph is engineering project leader, both at GE Healthcare’s Life Sciences business.


Tags: bioprocess facility design, single-use biomanufacturing